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Statistical Methods for Differential Analysis of Hi-C And ChIP-Seq Data

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자료유형E-Book
개인저자Nguyen, Duy.
단체저자명The University of Wisconsin - Madison. Statistics.
서명/저자사항Statistical Methods for Differential Analysis of Hi-C And ChIP-Seq Data.
발행사항[S.l.] : The University of Wisconsin - Madison., 2018
발행사항Ann Arbor : ProQuest Dissertations & Theses, 2018
형태사항140 p.
소장본 주기School code: 0262.
ISBN9780438207776
일반주기 Source: Dissertation Abstracts International, Volume: 79-12(E), Section: B.
Adviser: Sunduz Keles.
요약High-throughput sequencing has become a standard method in genomics research and made it possible to address important biological questions. In this thesis, we focus on developing statistical methodologies and software to analyze two important h
요약This thesis contains three major parts. In the first part, we discuss challenges in quantitative comparison of Hi-C data (often referred as ``differential (interaction) analysis'' problem) across different cellular conditions. Prior to this work
요약For the second part, we investigate statistical challenges in quantitative comparison of histone profiles across different cellular conditions from ChIP-seq data. Quantitative comparison of histone profiles largely depends on methods borrowed fr
요약In the last part, we describe our two novel software in the R packages TreeHic and tan. Through applications to real Hi-C and ChIP-seq data, we present how these software could reveal biological insights that are not captures in standard data a
일반주제명Statistics.
Biostatistics.
언어영어
기본자료 저록Dissertation Abstracts International79-12B(E).
Dissertation Abstract International
대출바로가기http://www.riss.kr/pdu/ddodLink.do?id=T14999873

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