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A Novel Bioinformatics Approach to Characterize and Integrate Messenger RNAs, Circular RNAs and Micro RNAs

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개인저자Nair, Asha A.
단체저자명University of Minnesota. Biomedical Informatics and Computational Biology.
서명/저자사항A Novel Bioinformatics Approach to Characterize and Integrate Messenger RNAs, Circular RNAs and Micro RNAs.
발행사항[S.l.] : University of Minnesota., 2018
발행사항Ann Arbor : ProQuest Dissertations & Theses, 2018
형태사항129 p.
소장본 주기School code: 0130.
ISBN9780438167827
일반주기 Source: Dissertation Abstracts International, Volume: 79-12(E), Section: B.
Advisers: Krishna R. Kalari
요약High-throughput Next Generation RNA sequencing (RNA-Seq) technology is affluent with information about the transcriptome, which includes both protein-coding and multiple non-coding regions. In a diseased state, complex interactions between these
요약In this dissertation, I developed three coherent bioinformatics solutions that aim to address these shortcomings in RNA-Seq. First, a comprehensive workflow called MAPR-Seq was developed to analyze and report various features of protein-coding m
요약Collectively, the three workflows were applied to the largest cohort of breast cancer samples (n=885) from The Cancer Genome Atlas (TCGA). Based on the results obtained from these workflows, I present several key findings that are pertinent to b
요약In general, the developed bioinformatics solutions can also be applied to RNA-Seq data of other cancer subtypes and diseases to identify unique messenger RNA -- microRNA -- circular RNA candidates that could be promising diagnostic targets towar
일반주제명Bioinformatics.
언어영어
기본자료 저록Dissertation Abstracts International79-12B(E).
Dissertation Abstract International
대출바로가기http://www.riss.kr/pdu/ddodLink.do?id=T14997825

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